m2g
0.3.0

Documentation

  • Installation
    • Docker Container
    • Manually Prepared Environment (For m2g-d pipeline)
      • External Dependencies
    • Requirements
      • Hardware Requirements
      • Python Requirements
  • Usage
    • Execution
      • Structural Connectome Pipeline (m2g-d)
      • Functional Connectome Pipeline (m2g-f)
      • Running both m2g-d and m2g-f
    • Demo
    • Working with S3 Datasets
      • Example Datasets
    • Command-Line Arguments
  • Diffusion Pipeline
    • Output Summary Table
    • Pipeline Summary
      • Preprocessing & Registration
      • Tensor Estimation
      • Tractography
      • Graph Estimation
    • Pipeline Outputs
  • Functional Pipeline
    • Output Summary Table
    • Pipeline Summary
      • Preprocessing
      • Registration
      • Nuisance Correction
      • Graph Estimation
    • Pipeline Outputs
  • Manuscript Figures
    • Figures
      • Data Preprocessing
      • Figure 2 - Group Consensus Connectomes
      • Figure 3 - Discriminability Results
      • Figure 4 - Connectome biological plausibility results

Useful Links

  • m2g @ GitHub
  • m2g @ PyPI
  • m2g lecture
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